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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6670914 chr1:121176059 A/G NBPF14 chr1:148003642-148025863:- 0.43 10.11 6.47E-22 Box Plot
THCA rs667213 chr11:77580995 G/A INTS4L1 chr7:64601603-64694600:+ 0.43 7.78 4.46E-14 Box Plot
THCA rs667225 chr11:77583855 A/C INTS4L1 chr7:64601603-64694600:+ 0.59 9.67 2.64E-20 Box Plot
THCA rs66724331 chr8:10789345 C/A SGK223 chr8:8175258-8244008:- 0.32 6.19 1.28E-9 Box Plot
THCA rs6674392 chr1:121260662 C/G NBPF14 chr1:148003642-148025863:- 0.43 10.03 1.25E-21 Box Plot
THCA rs66757203 chr6:26454956 C/T RNF5P1 chr8:38458179-38458718:- 0.71 6.09 2.36E-9 Box Plot
THCA rs66757203 chr6:26454956 C/T ZFP57 chr6:29640169-29648887:- 0.82 7.42 5.44E-13 Box Plot
THCA rs66785117 chr6:27523298 T/G BTN3A2 chr6:26365387-26378548:+ -0.89 -12.65 7.92E-32 Box Plot
THCA rs66785117 chr6:27523298 T/G RNF5P1 chr8:38458179-38458718:- 0.68 5.9 7.05E-9 Box Plot
THCA rs66785117 chr6:27523298 T/G ZFP57 chr6:29640169-29648887:- 0.9 8.51 2.31E-16 Box Plot
THCA rs668064 chr17:20496164 C/G MEIS3P1 chr17:15689932-15690889:+ 0.47 13.53 1.58E-35 Box Plot
THCA rs6681071 chr1:151231546 T/C PIPSL chr10:95717948-95721297:- 0.34 6.16 1.56E-9 Box Plot
THCA rs6681163 chr1:151231637 T/A PIPSL chr10:95717948-95721297:- 0.34 6.09 2.32E-9 Box Plot
THCA rs66823108 chr6:26377939 G/A RNF5P1 chr8:38458179-38458718:- 0.62 6.51 1.9E-10 Box Plot
THCA rs66827971 chr6:26365766 T/C RNF5P1 chr8:38458179-38458718:- 0.58 6.29 7.27E-10 Box Plot